5DOQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HDD, HEB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


Primary referenceStructure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases., Safarian S, Rajendran C, Muller H, Preu J, Langer JD, Ovchinnikov S, Hirose T, Kusumoto T, Sakamoto J, Michel H, Science. 2016 Apr 29;352(6285):583-6. doi: 10.1126/science.aaf2477. PMID:27126043
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (5doq.pdb1.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 5DOQ
  • CSU: Contacts of Structural Units for 5DOQ
  • Structure Factors (475 Kb)
  • Retrieve 5DOQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DOQ from S2C, [Save to disk]
  • Re-refined 5doq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DOQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5doq] [5doq_A] [5doq_B] [5doq_C]
  • SWISS-PROT database:

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