5DSV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B, F, L, K, N, I, H, E, G, C, A, M, J, D


Primary referenceDisassembly of the self-assembled, double-ring structure of proteasome alpha7 homo-tetradecamer by alpha6., Ishii K, Noda M, Yagi H, Thammaporn R, Seetaha S, Satoh T, Kato K, Uchiyama S, Sci Rep. 2015 Dec 14;5:18167. doi: 10.1038/srep18167. PMID:26657688
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (539 Kb) [Save to disk]
  • Biological Unit Coordinates (5dsv.pdb1.gz) 531 Kb
  • CSU: Contacts of Structural Units for 5DSV
  • Structure Factors (768 Kb)
  • Retrieve 5DSV in mmCIF format [Save to disk]
  • Re-refined 5dsv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DSV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dsv_J] [5dsv_I] [5dsv_K] [5dsv_L] [5dsv_M] [5dsv_N] [5dsv] [5dsv_A] [5dsv_B] [5dsv_C] [5dsv_D] [5dsv_E] [5dsv_F] [5dsv_G] [5dsv_H]
  • SWISS-PROT database:
  • Domain found in 5DSV: [Proteasome_A_N ] by SMART

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