5DVJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GAL, GOL, SO4	enzyme
Gene	CSV86
Gene Ontology	Chain Function Process Component B, A
Primary reference	High resolution structures of periplasmic glucose binding protein of Pseudomonas putida CSV86 reveal structural basis of its substrate specificity., Pandey S, Modak A, Phale PS, Bhaumik P, J Biol Chem. 2016 Feb 9. pii: jbc.M115.697268. PMID:26861882

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (273 Kb) [Save to disk] Biological Unit Coordinates (5dvj.pdb1.gz) 134 Kb Biological Unit Coordinates (5dvj.pdb2.gz) 135 Kb LPC: Ligand-Protein Contacts for 5DVJ CSU: Contacts of Structural Units for 5DVJ Structure Factors (1380 Kb) Retrieve 5DVJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DVJ from S2C, [Save to disk] Re-refined 5dvj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DVJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dvj] [5dvj_A] [5dvj_B] SWISS-PROT database:

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