5E24	Transport Dna Binding Dna	date	Sep 30, 2015
title	Structure Of The Su(H)-Hairless-Dna Repressor Complex
authors	R.A.Kovall, Z.Yuan
compound		source
Molecule: Maltose-Binding Periplasmic Protein Chain: A, C Synonym: Mbp,Mmbp,Maltodextrin-Binding Protein Engineered: Yes Mutation: Yes		Organism_scientific: Escherichia Coli O157:H7 Organism_taxid: 83334 Gene: Male, Z5632, Ecs5017 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Protein Hairless Chain: B, D Fragment: Unp Residues 214-251 Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: H, Cg5460 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Suppressor Of Hairless Protein Chain: E, F Fragment: Unp Residues 99-522 Synonym: J Kappa-Recombination Signal-Binding Protein,Rbp-J Engineered: Yes Mutation: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: Su(H), Drbp-Jk, Cg3497 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Apaptpcptptptpcpcpcpapcpap 3'); Chain: G Engineered: Yes		Synthetic: Yes Organism_scientific: Mus Musculus Organism_taxid: 10090
Molecule: Dna (5'-D(Tptpapcptpgptpgpgpgpapapap 3'); Chain: H Engineered: Yes		Synthetic: Yes Organism_scientific: Mus Musculus Organism_taxid: 10090
symmetry	Space Group: C 1 2 1	R_factor 0.173 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 177.710 93.890 154.390 90.00 109.83 90.00
method	X-Ray Diffraction	resolution	2.14 Å
ligand	EDO, GLC	enzyme
Gene Ontology	Chain Function Process Component A, C carbohydrate transmembrane t... F, E
Primary reference	Structure and Function of the Su(H)-Hairless Repressor Complex, the Major Antagonist of Notch Signaling in Drosophila melanogaster., Yuan Z, Praxenthaler H, Tabaja N, Torella R, Preiss A, Maier D, Kovall RA, PLoS Biol. 2016 Jul 12;14(7):e1002509. doi: 10.1371/journal.pbio.1002509., eCollection 2016 Jul. PMID:27404588

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (604 Kb) [Save to disk] Biological Unit Coordinates (5e24.pdb1.gz) 288 Kb Biological Unit Coordinates (5e24.pdb2.gz) 310 Kb Biological Unit Coordinates (5e24.pdb3.gz) 592 Kb LPC: Ligand-Protein Contacts for 5E24 CSU: Contacts of Structural Units for 5E24 Structure Factors (3598 Kb) Retrieve 5E24 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5E24 from S2C, [Save to disk] Re-refined 5e24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5E24 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5E24

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5e24_G] [5e24_A] [5e24] [5e24_H] [5e24_B] [5e24_F] [5e24_D] [5e24_C] [5e24_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5E24: [BTD] [LAG1_DNAbind ] by SMART

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Community annotation for 5E24 at PDBWiki (http://pdbwiki.org)

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