5E3E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE, NA enzyme
Gene YKRIS0001 ; YKRIS0001
Primary referenceThe CDI toxin of Yersinia kristensenii is a novel bacterial member of the RNase A superfamily., Batot G, Michalska K, Ekberg G, Irimpan EM, Joachimiak G, Jedrzejczak R, Babnigg G, Hayes CS, Joachimiak A, Goulding CW, Nucleic Acids Res. 2017 May 19;45(9):5013-5025. doi: 10.1093/nar/gkx230. PMID:28398546
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk]
  • Biological Unit Coordinates (5e3e.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (5e3e.pdb2.gz) 71 Kb
  • Biological Unit Coordinates (5e3e.pdb3.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 5E3E
  • CSU: Contacts of Structural Units for 5E3E
  • Structure Factors (3679 Kb)
  • Retrieve 5E3E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E3E from S2C, [Save to disk]
  • Re-refined 5e3e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5E3E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e3e_C] [5e3e_D] [5e3e_E] [5e3e] [5e3e_F] [5e3e_A] [5e3e_B]
  • SWISS-PROT database:

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