5E6R date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, MG, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLeukocyte integrin alphaLbeta2 headpiece structures: The alphaI domain, the pocket for the internal ligand, and concerted movements of its loops., Sen M, Springer TA, Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):2940-5. doi:, 10.1073/pnas.1601379113. Epub 2016 Mar 2. PMID:26936951
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (350 Kb) [Save to disk]
  • Biological Unit Coordinates (5e6r.pdb1.gz) 339 Kb
  • LPC: Ligand-Protein Contacts for 5E6R
  • CSU: Contacts of Structural Units for 5E6R
  • Structure Factors (574 Kb)
  • Retrieve 5E6R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E6R from S2C, [Save to disk]
  • Re-refined 5e6r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5E6R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e6r] [5e6r_A] [5e6r_B]
  • SWISS-PROT database:
  • Domains found in 5E6R: [INB] [Int_alpha] [PSI] [VWA ] by SMART

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