5EK0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5P2, PX4 enzyme
Gene ABU
Gene
Ontology
ChainFunctionProcessComponent
B, A, D, C


Primary referenceStructural basis of Nav1.7 inhibition by an isoform-selective small-molecule antagonist., Ahuja S, Mukund S, Deng L, Khakh K, Chang E, Ho H, Shriver S, Young C, Lin S, Johnson JP Jr, Wu P, Li J, Coons M, Tam C, Brillantes B, Sampang H, Mortara K, Bowman KK, Clark KR, Estevez A, Xie Z, Verschoof H, Grimwood M, Dehnhardt C, Andrez JC, Focken T, Sutherlin DP, Safina BS, Starovasnik MA, Ortwine DF, Franke Y, Cohen CJ, Hackos DH, Koth CM, Payandeh J, Science. 2015 Dec 18;350(6267):aac5464. doi: 10.1126/science.aac5464. PMID:26680203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (5ek0.pdb1.gz) 172 Kb
  • LPC: Ligand-Protein Contacts for 5EK0
  • CSU: Contacts of Structural Units for 5EK0
  • Structure Factors (928 Kb)
  • Retrieve 5EK0 in mmCIF format [Save to disk]
  • Re-refined 5ek0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EK0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ek0] [5ek0_A] [5ek0_B] [5ek0_C] [5ek0_D]
  • SWISS-PROT database:

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