5EKE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, UDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, C, A, B


Primary referenceStructure of the polyisoprenyl-phosphate glycosyltransferase GtrB and insights into the mechanism of catalysis., Ardiccioni C, Clarke OB, Tomasek D, Issa HA, von Alpen DC, Pond HL, Banerjee S, Rajashankar KR, Liu Q, Guan Z, Li C, Kloss B, Bruni R, Kloppmann E, Rost B, Manzini MC, Shapiro L, Mancia F, Nat Commun. 2016 Jan 5;7:10175. doi: 10.1038/ncomms10175. PMID:26729507
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (401 Kb) [Save to disk]
  • Biological Unit Coordinates (5eke.pdb1.gz) 392 Kb
  • LPC: Ligand-Protein Contacts for 5EKE
  • CSU: Contacts of Structural Units for 5EKE
  • Structure Factors (2873 Kb)
  • Retrieve 5EKE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EKE from S2C, [Save to disk]
  • Re-refined 5eke structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EKE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eke] [5eke_A] [5eke_B] [5eke_C] [5eke_D]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science