5F98 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand M7G, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, G, K, I, A, E


Primary referenceStructural basis for m7G recognition and 2'-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I., Devarkar SC, Wang C, Miller MT, Ramanathan A, Jiang F, Khan AG, Patel SS, Marcotrigiano J, Proc Natl Acad Sci U S A. 2016 Jan 5. pii: 201515152. PMID:26733676
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (663 Kb) [Save to disk]
  • Biological Unit Coordinates (5f98.pdb1.gz) 652 Kb
  • LPC: Ligand-Protein Contacts for 5F98
  • CSU: Contacts of Structural Units for 5F98
  • Structure Factors (1857 Kb)
  • Retrieve 5F98 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F98 from S2C, [Save to disk]
  • Re-refined 5f98 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5F98 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f98_I] [5f98] [5f98_A] [5f98_B] [5f98_C] [5f98_D] [5f98_E] [5f98_F] [5f98_G] [5f98_H] [5f98_J] [5f98_K] [5f98_L]
  • SWISS-PROT database:
  • Domains found in 5F98: [AAA] [DEXDc] [HELICc ] by SMART

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