5G1D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNew structural insight of C-terminal region of Syntenin-1, enhancing the molecular dimerization and inhibitory function related on Syndecan-4 signaling., Choi Y, Yun JH, Yoo J, Lee I, Kim H, Son HN, Kim IS, Yoon HS, Zimmermann P, Couchman JR, Cho HS, Oh ES, Lee W, Sci Rep. 2016 Nov 10;6:36818. doi: 10.1038/srep36818. PMID:27830760
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (5g1d.pdb1.gz) 109 Kb
  • CSU: Contacts of Structural Units for 5G1D
  • Structure Factors (163 Kb)
  • Retrieve 5G1D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5G1D from S2C, [Save to disk]
  • Re-refined 5g1d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5G1D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5g1d] [5g1d_A] [5g1d_B] [5g1d_C] [5g1d_D]
  • SWISS-PROT database:
  • Domain found in 5G1D: [PDZ ] by SMART

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