5GIV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, A, E, C, F


Primary referenceActive site gate of M32 carboxypeptidases illuminated by crystal structure and molecular dynamics simulations., Sharma B, Jamdar SN, Ghosh B, Yadav P, Kumar A, Kundu S, Goyal VD, Makde RD, Biochim Biophys Acta. 2017 Nov;1865(11 Pt A):1406-1415. doi:, 10.1016/j.bbapap.2017.07.023. Epub 2017 Aug 24. PMID:28844748
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (945 Kb) [Save to disk]
  • Biological Unit Coordinates (5giv.pdb1.gz) 315 Kb
  • Biological Unit Coordinates (5giv.pdb2.gz) 319 Kb
  • Biological Unit Coordinates (5giv.pdb3.gz) 316 Kb
  • LPC: Ligand-Protein Contacts for 5GIV
  • CSU: Contacts of Structural Units for 5GIV
  • Structure Factors (8989 Kb)
  • Retrieve 5GIV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GIV from S2C, [Save to disk]
  • Re-refined 5giv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GIV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5giv_A] [5giv_B] [5giv_C] [5giv_D] [5giv_E] [5giv_F]
  • SWISS-PROT database:

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