5GLF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural insights into the interaction of human p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease., Lim JJ, Lee Y, Yoon SY, Ly TT, Kang JY, Youn HS, An JY, Lee JG, Park KR, Kim TG, Yang JK, Jun Y, Eom SH, FEBS Lett. 2016 Oct 7. doi: 10.1002/1873-3468.12447. PMID:27714797
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (5glf.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (5glf.pdb2.gz) 34 Kb
  • Biological Unit Coordinates (5glf.pdb3.gz) 32 Kb
  • Biological Unit Coordinates (5glf.pdb4.gz) 32 Kb
  • CSU: Contacts of Structural Units for 5GLF
  • Structure Factors (635 Kb)
  • Retrieve 5GLF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GLF from S2C, [Save to disk]
  • Re-refined 5glf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GLF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5glf] [5glf_A] [5glf_B] [5glf_C] [5glf_D] [5glf_E] [5glf_F] [5glf_G] [5glf_H]
  • SWISS-PROT database:
  • Domains found in 5GLF: [CDC48_2] [CDC48_N ] by SMART

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