5GTI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BCR, BCT, CA, CL, CLA, DGD, FE2, FME, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, a


C, c


E, e


I, i


K, k


M, m


R


T, t


Y, y


b, B


d, D


f, F


h, H


j, J


l, L


o, O
  • oxygen evolving activity


    • u, U


    v, V


    x, X


    z, Z


    Primary referenceLight-induced structural changes and the site of O=O bond formation in PSII caught by XFEL., Suga M, Akita F, Sugahara M, Kubo M, Nakajima Y, Nakane T, Yamashita K, Umena Y, Nakabayashi M, Yamane T, Nakano T, Suzuki M, Masuda T, Inoue S, Kimura T, Nomura T, Yonekura S, Yu LJ, Sakamoto T, Motomura T, Chen JH, Kato Y, Noguchi T, Tono K, Joti Y, Kameshima T, Hatsui T, Nango E, Tanaka R, Naitow H, Matsuura Y, Yamashita A, Yamamoto M, Nureki O, Yabashi M, Ishikawa T, Iwata S, Shen JR, Nature. 2017 Mar 2;543(7643):131-135. doi: 10.1038/nature21400. Epub 2017 Feb 20. PMID:28219079
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2217 Kb) [Save to disk]
  • Biological Unit Coordinates (5gti.pdb1.gz) 1090 Kb
  • Biological Unit Coordinates (5gti.pdb2.gz) 1067 Kb
  • LPC: Ligand-Protein Contacts for 5GTI
  • CSU: Contacts of Structural Units for 5GTI
  • Structure Factors (6303 Kb)
  • Retrieve 5GTI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GTI from S2C, [Save to disk]
  • Re-refined 5gti structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GTI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gti] [5gti_A] [5gti_B] [5gti_C] [5gti_D] [5gti_E] [5gti_F] [5gti_H] [5gti_I] [5gti_J] [5gti_K] [5gti_L] [5gti_M] [5gti_O] [5gti_R] [5gti_T] [5gti_U] [5gti_V] [5gti_X] [5gti_Y] [5gti_Z] [5gti_a] [5gti_b] [5gti_c] [5gti_d] [5gti_e] [5gti_f] [5gti_h] [5gti_i] [5gti_j] [5gti_k] [5gti_l] [5gti_m] [5gti_o] [5gti_t] [5gti_u] [5gti_v] [5gti_x] [5gti_y] [5gti_z]
  • SWISS-PROT database:

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