5GV3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceLysosome-associated membrane proteins-1 and -2 (LAMP-1 and LAMP-2) assemble via distinct modes., Terasawa K, Tomabechi Y, Ikeda M, Ehara H, Kukimoto-Niino M, Wakiyama M, Podyma-Inoue KA, Rajapakshe AR, Watabe T, Shirouzu M, Hara-Yokoyama M, Biochem Biophys Res Commun. 2016 Oct 21;479(3):489-495. doi:, 10.1016/j.bbrc.2016.09.093. Epub 2016 Sep 20. PMID:27663661
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (5gv3.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (5gv3.pdb2.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 5GV3
  • CSU: Contacts of Structural Units for 5GV3
  • Structure Factors (594 Kb)
  • Retrieve 5GV3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GV3 from S2C, [Save to disk]
  • View 5GV3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gv3_A] [5gv3_B]
  • SWISS-PROT database:

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