5GZK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, BGC, CL, K, PEG, PG4, PO4 enzyme
Gene CPIN
Primary referenceBiochemical and structural analyses of a bacterial endo-beta-1,2-glucanase reveal a new glycoside hydrolase family., Abe K, Nakajima M, Yamashita T, Matsunaga H, Kamisuki S, Nihira T, Takahashi Y, Sugimoto N, Miyanaga A, Nakai H, Arakawa T, Fushinobu S, Taguchi H, J Biol Chem. 2017 May 5;292(18):7487-7506. doi: 10.1074/jbc.M116.762724. Epub, 2017 Mar 7. PMID:28270506
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (5gzk.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (5gzk.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 5GZK
  • CSU: Contacts of Structural Units for 5GZK
  • Structure Factors (2576 Kb)
  • Retrieve 5GZK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GZK from S2C, [Save to disk]
  • Re-refined 5gzk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GZK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gzk] [5gzk_A] [5gzk_B]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science