5H07	Signaling Protein	date	Oct 04, 2016
title	Tnip2-Ub Complex, C2 Form
authors	Y.C.Lo, S.C.Lin
compound		source
Molecule: Polyubiquitin-C Chain: A Fragment: Unp Residues 1-228 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ubc Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Tnfaip3-Interacting Protein 2 Chain: D, C Fragment: Unp Residues 257-344 Synonym: A20-Binding Inhibitor Of Nf-Kappa-B Activation 2,A Fetal Liver Lkb1-Interacting Protein; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tnip2, Abin2, Flip1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.211 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.765 80.972 65.352 90.00 114.28 90.00
method	X-Ray Diffraction	resolution	2.59 Å
Primary reference	Structural Insights into Linear Tri-ubiquitin Recognition by A20-Binding Inhibitor of NF-kappaB, ABIN-2., Lin SM, Lin SC, Hong JY, Su TW, Kuo BJ, Chang WH, Tu YF, Lo YC, Structure. 2017 Jan 3;25(1):66-78. doi: 10.1016/j.str.2016.11.005. Epub 2016 Dec , 1. PMID:27916521

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk] Biological Unit Coordinates (5h07.pdb1.gz) 126 Kb CSU: Contacts of Structural Units for 5H07 Structure Factors (238 Kb) Retrieve 5H07 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5H07 from S2C, [Save to disk] Re-refined 5h07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5H07 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5H07

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5h07_C] [5h07_A] [5h07_D] [5h07] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5H07

Community annotation for 5H07 at PDBWiki (http://pdbwiki.org)

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