5HLT	Hydrolase	date	Jan 15, 2016
title	Crystal Structure Of Pyrene- And Phenanthrene-Modified Dna I With The Bpuj1 Endonuclease Binding Domain
authors	M.Probst, W.Aeschimann, T.T.H.Chau, S.M.Langenegger, A.Stocker
compound		source
Molecule: Restriction Endonuclease R.Bpuji Chain: A, B Engineered: Yes		Organism_scientific: Bacillus Pumilus Organism_taxid: 1408 Gene: Bpujir Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Gpypytpapcpcpcpgptpgpgpa)-3 Chain: L, C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'-D(Tpcpcpapcpgpgpgptpapypyc)-3 Chain: M, D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.201 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.870 85.503 115.905 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.67 Å
ligand	YPE	enzyme
Primary reference	Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease., Probst M, Aeschimann W, Chau TT, Langenegger SM, Stocker A, Haner R, Nucleic Acids Res. 2016 Sep 6;44(15):7079-89. doi: 10.1093/nar/gkw644. Epub 2016 , Jul 15. PMID:27422870

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk] Biological Unit Coordinates (5hlt.pdb1.gz) 113 Kb Biological Unit Coordinates (5hlt.pdb2.gz) 111 Kb LPC: Ligand-Protein Contacts for 5HLT CSU: Contacts of Structural Units for 5HLT Structure Factors (562 Kb) Retrieve 5HLT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HLT from S2C, [Save to disk] Re-refined 5hlt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hlt_B] [5hlt] [5hlt_M] [5hlt_D] [5hlt_C] [5hlt_L] [5hlt_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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