5HUM Viral Protein date Jan 27, 2016
title The Crystal Structure Of Neuraminidase From Asichuan26221 Influenza Virus
authors H.Yang, P.J.Carney, Z.Guo, J.C.Chang, J.Stevens
compound source
Molecule: Neuraminidase
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Influenza A Virus (Achickensichuanncjpl12014(H5n6));
Organism_taxid: 1529593
Strain: Achickensichuanncjpl12014(H5n6)
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 1 21 1
R_factor 0.198 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.335 76.277 117.211 90.00 90.02 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (5hum.pdb1.gz) 273 Kb
  • LPC: Ligand-Protein Contacts for 5HUM
  • CSU: Contacts of Structural Units for 5HUM
  • Structure Factors (5524 Kb)
  • Retrieve 5HUM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HUM from S2C, [Save to disk]
  • Re-refined 5hum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HUM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HUM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hum] [5hum_D] [5hum_A] [5hum_C] [5hum_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HUM
  • Community annotation for 5HUM at PDBWiki (http://pdbwiki.org)

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