5I7D Signaling Protein date Feb 17, 2016
title Crystal Structure Of Srgap2 F-Barx Wt Form-2
authors M.Sporny, J.Guez-Haddad, M.N.Isupov, Y.Opatowsky
compound source
Molecule: Slit-Robo Rho Gtpase-Activating Protein 2
Chain: A, B
Synonym: Srgap2,Formin-Binding Protein 2,Rho Gtpase-Activat Protein 34;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Srgap2, Arhgap34, Fnbp2, Kiaa0456, Srgap2a
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.277 R_Free 0.349
crystal
cell
length a length b length c angle alpha angle beta angle gamma
120.904 49.926 234.084 90.00 102.57 90.00
method X-Ray Diffractionresolution 3.95 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (5i7d.pdb1.gz) 137 Kb
  • Biological Unit Coordinates (5i7d.pdb2.gz) 138 Kb
  • CSU: Contacts of Structural Units for 5I7D
  • Structure Factors (262 Kb)
  • Retrieve 5I7D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I7D from S2C, [Save to disk]
  • View 5I7D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5I7D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i7d_B] [5i7d_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5I7D
  • Community annotation for 5I7D at PDBWiki (http://pdbwiki.org)

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