OCA Atlas for 5JCZ

5JCZ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACT, BEF, EDO, GDP, GOL, MG

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, D, I

Primary reference

Coordinated recruitment of Spir actin nucleators and myosin V motors to Rab11 vesicle membranes., Pylypenko O, Welz T, Tittel J, Kollmar M, Chardon F, Malherbe G, Weiss S, Michel CI, Samol-Wolf A, Grasskamp AT, Hume A, Goud B, Baron B, England P, Titus MA, Schwille P, Weidemann T, Houdusse A, Kerkhoff E, Elife. 2016 Sep 13;5. pii: e17523. doi: 10.7554/eLife.17523. PMID:27623148

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (556 Kb) [Save to disk]

Biological Unit Coordinates (5jcz.pdb1.gz) 190 Kb

Biological Unit Coordinates (5jcz.pdb2.gz) 193 Kb

Biological Unit Coordinates (5jcz.pdb3.gz) 171 Kb

LPC: Ligand-Protein Contacts for 5JCZ

CSU: Contacts of Structural Units for 5JCZ

Structure Factors (1330 Kb)

Retrieve 5JCZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5JCZ from S2C, [Save to disk]

Re-refined 5jcz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JCZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jcz] [5jcz_A] [5jcz_B] [5jcz_C] [5jcz_D] [5jcz_E] [5jcz_I]

SWISS-PROT database:

Domains found in 5JCZ: [DIL] [RAB ] by SMART

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