5JK2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene TP
Primary referenceThe Structure of Treponema pallidum Tp0751 (Pallilysin) Reveals a Non-canonical Lipocalin Fold That Mediates Adhesion to Extracellular Matrix Components and Interactions with Host Cells., Parker ML, Houston S, Petrosova H, Lithgow KV, Hof R, Wetherell C, Kao WC, Lin YP, Moriarty TJ, Ebady R, Cameron CE, Boulanger MJ, PLoS Pathog. 2016 Sep 28;12(9):e1005919. doi: 10.1371/journal.ppat.1005919., eCollection 2016 Sep. PMID:27683203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (5jk2.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (5jk2.pdb2.gz) 23 Kb
  • Biological Unit Coordinates (5jk2.pdb3.gz) 23 Kb
  • Biological Unit Coordinates (5jk2.pdb4.gz) 24 Kb
  • Biological Unit Coordinates (5jk2.pdb5.gz) 23 Kb
  • Biological Unit Coordinates (5jk2.pdb6.gz) 23 Kb
  • Biological Unit Coordinates (5jk2.pdb7.gz) 22 Kb
  • Biological Unit Coordinates (5jk2.pdb8.gz) 22 Kb
  • Biological Unit Coordinates (5jk2.pdb9.gz) 22 Kb
  • CSU: Contacts of Structural Units for 5JK2
  • Structure Factors (2097 Kb)
  • Retrieve 5JK2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JK2 from S2C, [Save to disk]
  • Re-refined 5jk2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JK2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jk2] [5jk2_A] [5jk2_B] [5jk2_C] [5jk2_D] [5jk2_E] [5jk2_F] [5jk2_G] [5jk2_H] [5jk2_I]
  • SWISS-PROT database:

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