5JP3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AYE enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, C, E, A


Primary referenceThe Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases., Pruneda JN, Durkin CH, Geurink PP, Ovaa H, Santhanam B, Holden DW, Komander D, Mol Cell. 2016 Jul 21;63(2):261-76. doi: 10.1016/j.molcel.2016.06.015. Epub 2016 , Jul 14. PMID:27425412
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (345 Kb) [Save to disk]
  • Biological Unit Coordinates (5jp3.pdb1.gz) 90 Kb
  • Biological Unit Coordinates (5jp3.pdb2.gz) 86 Kb
  • Biological Unit Coordinates (5jp3.pdb3.gz) 84 Kb
  • Biological Unit Coordinates (5jp3.pdb4.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 5JP3
  • CSU: Contacts of Structural Units for 5JP3
  • Structure Factors (2557 Kb)
  • Retrieve 5JP3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JP3 from S2C, [Save to disk]
  • Re-refined 5jp3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JP3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jp3] [5jp3_A] [5jp3_B] [5jp3_C] [5jp3_D] [5jp3_E] [5jp3_F] [5jp3_G] [5jp3_H]
  • SWISS-PROT database:
  • Domain found in 5JP3: [UBQ ] by SMART

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