5K36 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • B

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • C

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • D

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • E

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • F

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • G

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • H

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • I

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • J


    K
  • endoribonuclease activity

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • Primary referenceNuclear RNA Exosome at 3.1 A Reveals Substrate Specificities, RNA Paths, and Allosteric Inhibition of Rrp44/Dis3., Zinder JC, Wasmuth EV, Lima CD, Mol Cell. 2016 Nov 17;64(4):734-745. doi: 10.1016/j.molcel.2016.09.038. Epub 2016, Nov 3. PMID:27818140
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (618 Kb) [Save to disk]
  • Biological Unit Coordinates (5k36.pdb1.gz) 608 Kb
  • LPC: Ligand-Protein Contacts for 5K36
  • CSU: Contacts of Structural Units for 5K36
  • Structure Factors (6442 Kb)
  • Retrieve 5K36 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K36 from S2C, [Save to disk]
  • Re-refined 5k36 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5K36 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k36] [5k36_A] [5k36_B] [5k36_C] [5k36_D] [5k36_E] [5k36_F] [5k36_G] [5k36_H] [5k36_I] [5k36_J] [5k36_K] [5k36_L] [5k36_M]
  • SWISS-PROT database:
  • Domains found in 5K36: [35EXOc] [HRDC] [PINc] [RNB] [S1 ] by SMART

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