5K87		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MLI	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	The PrpF protein of Shewanella oneidensis MR-1 catalyzes the isomerization of 2-methyl-cis-aconitate during the catabolism of propionate via the AcnD-dependent 2-methylcitric acid cycle., Rocco CJ, Wetterhorn KM, Garvey GS, Rayment I, Escalante-Semerena JC, PLoS One. 2017 Nov 16;12(11):e0188130. doi: 10.1371/journal.pone.0188130., eCollection 2017. PMID:29145506

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk] Biological Unit Coordinates (5k87.pdb1.gz) 140 Kb LPC: Ligand-Protein Contacts for 5K87 CSU: Contacts of Structural Units for 5K87 Structure Factors (4436 Kb) Retrieve 5K87 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5K87 from S2C, [Save to disk] Re-refined 5k87 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5K87 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5k87_A] [5k87_B] SWISS-PROT database:

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