5KDP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MLI, NA	enzyme
Gene	DDE
Gene Ontology	Chain Function Process Component A, C
Primary reference	Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase., Bodea S, Funk MA, Balskus EP, Drennan CL, Cell Chem Biol. 2016 Sep 23. pii: S2451-9456(16)30287-2. doi:, 10.1016/j.chembiol.2016.07.020. PMID:27642068

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (781 Kb) [Save to disk] Biological Unit Coordinates (5kdp.pdb1.gz) 773 Kb LPC: Ligand-Protein Contacts for 5KDP CSU: Contacts of Structural Units for 5KDP Structure Factors (2474 Kb) Retrieve 5KDP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KDP from S2C, [Save to disk] Re-refined 5kdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KDP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kdp] [5kdp_A] [5kdp_C] SWISS-PROT database:

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