5KJS Transferase date Jun 20, 2016
title Crystal Structure Of Arabidopsis Thaliana Hct
authors O.Levsh, Y.C.Chiang, C.Tung, J.P.Noel, Y.Wang, J.K.Weng
compound source
Molecule: Shikimate O-Hydroxycinnamoyltransferase
Chain: A
Synonym: Hydroxycinnamoyl Transferase,Hydroxycinnamoyl-Coen Shikimatequinate Hydroxycinnamoyltransferase;
Ec: 2.3.1.133
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Hst, Hct, At5g48930, K19e20.4
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 32 2 1
R_factor 0.180 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.910 99.910 83.870 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand MSE enzyme Transferase E.C.2.3.1.133 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase., Levsh O, Chiang YC, Tung CF, Noel JP, Wang Y, Weng JK, Biochemistry. 2016 Nov 2. PMID:27805809
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (5kjs.pdb1.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 5KJS
  • CSU: Contacts of Structural Units for 5KJS
  • Structure Factors (529 Kb)
  • Retrieve 5KJS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KJS from S2C, [Save to disk]
  • Re-refined 5kjs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KJS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5KJS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kjs_A] [5kjs]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5KJS
  • Community annotation for 5KJS at PDBWiki (http://pdbwiki.org)

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