5KVM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, GOL, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis for Regulation of GPR56/ADGRG1 by Its Alternatively Spliced Extracellular Domains., Salzman GS, Ackerman SD, Ding C, Koide A, Leon K, Luo R, Stoveken HM, Fernandez CG, Tall GG, Piao X, Monk KR, Koide S, Arac D, Neuron. 2016 Sep 21;91(6):1292-1304. doi: 10.1016/j.neuron.2016.08.022. PMID:27657451
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk]
  • Biological Unit Coordinates (5kvm.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 5KVM
  • CSU: Contacts of Structural Units for 5KVM
  • Structure Factors (268 Kb)
  • Retrieve 5KVM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KVM from S2C, [Save to disk]
  • Re-refined 5kvm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KVM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kvm_A] [5kvm_B] [5kvm_C] [5kvm]
  • SWISS-PROT database:
  • Domains found in 5KVM: [FN3] [GPS ] by SMART

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