5L6W Transferase date May 31, 2016
title Structure Of The Limk1-Atpgammas-Cfl1 Complex
authors E.Salah, S.Mathea, S.Oerum, J.A.Newman, C.Tallant, R.Adamson, P.Ca A.Beltrami, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra A.N.Bullock
compound source
Molecule: Lim Domain Kinase 1
Chain: L
Synonym: Limk-1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Limk1, Limk
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Cofilin-1
Chain: C
Synonym: 18 Kda Phosphoprotein,P18,Cofilin,Non-Muscle Isofo
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cfl1, Cfl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.226 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.679 80.679 237.590 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.53 Å
ligand AGS enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
C


L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (5l6w.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 5L6W
  • CSU: Contacts of Structural Units for 5L6W
  • Structure Factors (668 Kb)
  • Retrieve 5L6W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L6W from S2C, [Save to disk]
  • Re-refined 5l6w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5L6W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5L6W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5l6w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l6w] [5l6w_L] [5l6w_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5L6W: [ADF] [STYKc ] by SMART
  • Other resources with information on 5L6W
  • Community annotation for 5L6W at PDBWiki (http://pdbwiki.org)

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