5L7V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GNL enzyme
Gene BVU
Primary referenceStructural and mechanistic insights into a Bacteroides vulgatus retaining N-acetyl-beta-galactosaminidase that uses neighbouring group participation., Roth C, Petricevic M, John A, Goddard-Borger ED, Davies GJ, Williams SJ, Chem Commun (Camb). 2016 Sep 25;52(74):11096-9. doi: 10.1039/c6cc04649e. Epub, 2016 Aug 22. PMID:27546776
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (383 Kb) [Save to disk]
  • Biological Unit Coordinates (5l7v.pdb1.gz) 377 Kb
  • LPC: Ligand-Protein Contacts for 5L7V
  • CSU: Contacts of Structural Units for 5L7V
  • Structure Factors (523 Kb)
  • Retrieve 5L7V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L7V from S2C, [Save to disk]
  • Re-refined 5l7v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5L7V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l7v] [5l7v_A] [5l7v_B]
  • SWISS-PROT database:

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