5LFZ	Hydrolase	date	Jul 05, 2016
title	T48 Deacetylase
authors	U.Rothweiler
compound		source
Molecule: Arce4a Chain: A Engineered: Yes Other_details: Dna Sequence Deposited At Http: Www.Ebi.Ac.Ukenadataviewlt630322		Organism_scientific: Arthrobacter Sp. Aw19m34-1 Organism_taxid: 1914985 Gene: Aa310_02990, Atc04_16800 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.179 R_Free 0.205
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.090 56.770 76.860 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.56 Å
ligand	NI	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structure and function of a CE4 deacetylase isolated from a marine environment., Tuveng TR, Rothweiler U, Udatha G, Vaaje-Kolstad G, Smalas A, Eijsink VGH, PLoS One. 2017 Nov 6;12(11):e0187544. doi: 10.1371/journal.pone.0187544., eCollection 2017. PMID:29107991

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk] Biological Unit Coordinates (5lfz.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 5LFZ CSU: Contacts of Structural Units for 5LFZ Structure Factors (490 Kb) Retrieve 5LFZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LFZ from S2C, [Save to disk] Re-refined 5lfz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5LFZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5LFZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lfz_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5LFZ

Community annotation for 5LFZ at PDBWiki (http://pdbwiki.org)

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