5LXY	Rna Binding Protein	date	Sep 23, 2016
title	Structure Of The Minimal Rbm7 - Zcchc8 Complex
authors	S.Falk, K.Finogenova, C.Benda, E.Conti
compound		source
Molecule: Rna-Binding Protein 7 Chain: A, B, E, G, I, K, M Synonym: Rna-Binding Motif Protein 7 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rbm7 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Zinc Finger Cchc Domain-Containing Protein 8 Chain: D, C, F, H, J, L, N Synonym: Tramp-Like Complex Rna-Binding Factor Zcchc8 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Zcchc8 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.262 R_Free 0.300
crystal cell	length a length b length c angle alpha angle beta angle gamma 178.771 66.575 111.912 90.00 126.57 90.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	BR	enzyme
Gene Ontology	Chain Function Process Component A, M, K, I, G, E, B
Primary reference	Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors., Falk S, Finogenova K, Melko M, Benda C, Lykke-Andersen S, Jensen TH, Conti E, Nat Commun. 2016 Dec 1;7:13573. doi: 10.1038/ncomms13573. PMID:27905398

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (5lxy.pdb1.gz) 19 Kb Biological Unit Coordinates (5lxy.pdb2.gz) 19 Kb Biological Unit Coordinates (5lxy.pdb3.gz) 18 Kb Biological Unit Coordinates (5lxy.pdb4.gz) 17 Kb Biological Unit Coordinates (5lxy.pdb5.gz) 18 Kb Biological Unit Coordinates (5lxy.pdb6.gz) 17 Kb Biological Unit Coordinates (5lxy.pdb7.gz) 15 Kb LPC: Ligand-Protein Contacts for 5LXY CSU: Contacts of Structural Units for 5LXY Structure Factors (187 Kb) Retrieve 5LXY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LXY from S2C, [Save to disk] Re-refined 5lxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5LXY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5LXY

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lxy_F] [5lxy_E] [5lxy_C] [5lxy] [5lxy_D] [5lxy_N] [5lxy_I] [5lxy_M] [5lxy_G] [5lxy_K] [5lxy_A] [5lxy_B] [5lxy_L] [5lxy_J] [5lxy_H] SWISS-PROT database: Domain organization of by SWISSPFAM

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