5MDD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component E, W, B, G, F, C, D, A J, I, a, f, b, H
Primary reference	The structure and flexibility of conical HIV-1 capsids determined within intact virions., Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA, Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (5mdd.pdb1.gz) 99 Kb CSU: Contacts of Structural Units for 5MDD Retrieve 5MDD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MDD from S2C, [Save to disk]

View 5MDD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mdd] [5mdd_A] [5mdd_B] [5mdd_C] [5mdd_D] [5mdd_E] [5mdd_F] [5mdd_G] [5mdd_H] [5mdd_I] [5mdd_J] [5mdd_W] [5mdd_a] [5mdd_b] [5mdd_f] SWISS-PROT database:

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