5MGS	Immune System	date	Nov 22, 2016
title	Human Receptor Nkr-P1 In Deglycosylated Form, Extracellular
authors	T.Skalova, J.Blaha, J.Stransky, T.Koval, J.Hasek, Z.Yuguang, K.Har O.Vanek, J.Dohnalek
compound		source
Molecule: Killer Cell Lectin-Like Receptor Subfamily B Memb Chain: A, B, C, D, E, F, G, H Synonym: C-Type Lectin Domain Family 5 Member B,Hnkr-P1a,Nk Natural Killer Cell Surface Protein P1a; Engineered: Yes Other_details: Protein Was Deglycosylated By Endo-F1 Enzyme		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Lymphocytes, Natural Killer Cell Gene: Klrb1, Clec5b, Nkrp1a Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293s Gnti- Expression_system_atcc_number: Crl-3022 Expression_system_organ: Kidney Expression_system_tissue: Human Embryonic Kidney Expression_system_vector_type: Plasmid Expression_system_plasmid: Popinggtneo
symmetry	Space Group: P 1	R_factor 0.157 R_Free 0.207
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.806 68.404 101.564 101.88 100.72 100.64
method	X-Ray Diffraction	resolution	1.90 Å

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk] Biological Unit Coordinates (5mgs.pdb1.gz) 49 Kb Biological Unit Coordinates (5mgs.pdb2.gz) 48 Kb Biological Unit Coordinates (5mgs.pdb3.gz) 48 Kb Biological Unit Coordinates (5mgs.pdb4.gz) 49 Kb CSU: Contacts of Structural Units for 5MGS Structure Factors (3468 Kb) Retrieve 5MGS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MGS from S2C, [Save to disk]

View 5MGS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5MGS

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5mgs from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mgs_A] [5mgs_F] [5mgs_H] [5mgs_E] [5mgs_D] [5mgs_G] [5mgs_C] [5mgs_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5MGS

Community annotation for 5MGS at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---