5MQ4 Transferase date Dec 20, 2016
title Crystal Structure Of The Leucine Zipper Of Human Prkcbp1
authors T.Krojer, P.Savitsky, S.Picaud, J.Newman, C.Tallant, C.Heroven, F. Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, P.Filippakopoulo
compound source
Molecule: Protein Kinase C-Binding Protein 1
Chain: A, B, C, D, E, F
Synonym: Cutaneous T-Cell Lymphoma-Associated Antigen Se14- Associated Antigen Se14-3,Rack7,Zinc Finger Mynd Domain-Con Protein 8;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zmynd8, Kiaa1125, Prkcbp1, Rack7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.208 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.638 237.049 210.144 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand SO4, ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (5mq4.pdb1.gz) 81 Kb
  • Biological Unit Coordinates (5mq4.pdb2.gz) 80 Kb
  • Biological Unit Coordinates (5mq4.pdb3.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 5MQ4
  • CSU: Contacts of Structural Units for 5MQ4
  • Structure Factors (450 Kb)
  • Retrieve 5MQ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MQ4 from S2C, [Save to disk]
  • Re-refined 5mq4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5MQ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5MQ4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5mq4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mq4] [5mq4_F] [5mq4_D] [5mq4_C] [5mq4_E] [5mq4_A] [5mq4_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5MQ4
  • Community annotation for 5MQ4 at PDBWiki (http://pdbwiki.org)

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