5MQI Replication date Dec 20, 2016
title Crystal Structure Of The N-Terminal Domain Of Human Timeless
authors S.Holzer, M.L.Kilkenny, L.Pellegrini
compound source
Molecule: Protein Timeless Homolog,Protein Timeless Homolog
Chain: A
Synonym: Htim,Htim
Engineered: Yes
Other_details: The Recombinant Version Of The N-Terminal Do Human Timeless Used For X-Ray Crystal Structure Determinati An Internal Deletion Of Amino Acids 239 To 330, Which Were With The Artificial Linker Sequence Gstgst.
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Timeless, Tim, Tim1, Timeless1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.170 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.008 71.337 185.046 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand SO4 enzyme
Primary referenceCrystal structure of the N-terminal domain of human Timeless and its interaction with Tipin., Holzer S, Degliesposti G, Kilkenny ML, Maslen SL, Matak-Vinkovic D, Skehel M, Pellegrini L, Nucleic Acids Res. 2017 Feb 25. doi: 10.1093/nar/gkx139. PMID:28334766
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (5mqi.pdb1.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 5MQI
  • CSU: Contacts of Structural Units for 5MQI
  • Structure Factors (1514 Kb)
  • Retrieve 5MQI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MQI from S2C, [Save to disk]
  • Re-refined 5mqi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5MQI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5MQI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mqi] [5mqi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5MQI
  • Community annotation for 5MQI at PDBWiki (http://pdbwiki.org)

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