5MX1	Cell Adhesion	date	Jan 20, 2017
title	Crystal Structure Of Human Chondroadherin
authors	P.Paracuellos, E.Hohenester
compound		source
Molecule: Chondroadherin Chain: A, B Synonym: Cartilage Leucine-Rich Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Chad, Slrr4a Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293 C18 Expression_system_atcc_number: Atcc-Crl-10852 Expression_system_plasmid: Pcep-Pu
symmetry	Space Group: C 1 2 1	R_factor 0.188 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 215.450 60.700 57.660 90.00 100.60 90.00
method	X-Ray Diffraction	resolution	2.17 Å
ligand	CL, NI, PO4	enzyme
Primary reference	Structural and functional analysis of two small leucine-rich repeat proteoglycans, fibromodulin and chondroadherin., Paracuellos P, Kalamajski S, Bonna A, Bihan D, Farndale RW, Hohenester E, Matrix Biol. 2017 Feb 17. pii: S0945-053X(17)30015-X. doi:, 10.1016/j.matbio.2017.02.002. PMID:28215822

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (331 Kb) [Save to disk] Biological Unit Coordinates (5mx1.pdb1.gz) 165 Kb Biological Unit Coordinates (5mx1.pdb2.gz) 163 Kb LPC: Ligand-Protein Contacts for 5MX1 CSU: Contacts of Structural Units for 5MX1 Structure Factors (1751 Kb) Retrieve 5MX1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MX1 from S2C, [Save to disk] Re-refined 5mx1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5MX1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5MX1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mx1] [5mx1_A] [5mx1_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5MX1

Community annotation for 5MX1 at PDBWiki (http://pdbwiki.org)

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