5MXM	Transferase	date	Jan 23, 2017
title	The X-Ray Structure Of Human M190i Phosphoglycerate Kinase 1
authors	A.Ilari, A.Fiorillo, A.Cipollone, M.Petrosino
compound		source
Molecule: Phosphoglycerate Kinase 1 Chain: A Synonym: Cell Migration-Inducing Gene 10 Protein,Primer Rec Protein 2,Prp 2; Ec: 2.7.2.3 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pgk1, Pgka, Mig10, Oksw-Cl.110 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.176 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.363 91.104 109.010 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.05 Å
ligand	3PG, ADP, BTB, MG	enzyme	Transferase E.C.2.7.2.3 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	The phosphoglycerate kinase 1 variants found in carcinoma cells display different catalytic activity and conformational stability compared to the native enzyme., Fiorillo A, Petrosino M, Ilari A, Pasquo A, Cipollone A, Maggi M, Chiaraluce R, Consalvi V, PLoS One. 2018 Jul 11;13(7):e0199191. doi: 10.1371/journal.pone.0199191., eCollection 2018. PMID:29995887

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (5mxm.pdb1.gz) 69 Kb LPC: Ligand-Protein Contacts for 5MXM CSU: Contacts of Structural Units for 5MXM Structure Factors (1025 Kb) Retrieve 5MXM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MXM from S2C, [Save to disk]

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Visual 3D analysis of 5MXM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mxm_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 5MXM at PDBWiki (http://pdbwiki.org)

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