5NT1	Ligase	date	Apr 27, 2017
title	Complex Of Influenza A Ns1 Effector Domain With Trim25 Coile
authors	M.G.Koliopoulos, K.Rittinger
compound		source
Molecule: E3 Ubiquitinisg15 Ligase Trim25 Chain: A, E, I Synonym: Estrogen-Responsive Finger Protein,Ring Finger Pro Ring-Type E3 Ubiquitin Transferase,Ring-Type E3 Ubiquitin T Trim25,Tripartite Motif-Containing Protein 25,Ubiquitinisg Conjugating Enzyme Trim25,Zinc Finger Protein 147; Ec: 6.3.2.-,2.3.2.27 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Trim25, Efp, Rnf147, Znf147 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Non-Structural Protein 1 Chain: B, F, J Synonym: Ns1,Ns1a Engineered: Yes		Organism_scientific: Influenza A Virus (Strain Apuerto Ric H1n1); Organism_taxid: 211044 Strain: Apuerto Rico81934 H1n1 Gene: Ns Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 2	R_factor 0.195 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 131.380 225.230 146.430 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.82 Å
ligand		enzyme	Ligase E.C.6.3.2 BRENDA
Gene Ontology	Chain Function Process Component F, J, B
Primary reference	Molecular mechanism of influenza A NS1-mediated TRIM25 recognition and inhibition., Koliopoulos MG, Lethier M, van der Veen AG, Haubrich K, Hennig J, Kowalinski E, Stevens RV, Martin SR, Reis E Sousa C, Cusack S, Rittinger K, Nat Commun. 2018 May 8;9(1):1820. doi: 10.1038/s41467-018-04214-8. PMID:29739942

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (306 Kb) [Save to disk] Biological Unit Coordinates (5nt1.pdb1.gz) 198 Kb Biological Unit Coordinates (5nt1.pdb2.gz) 198 Kb Biological Unit Coordinates (5nt1.pdb3.gz) 198 Kb CSU: Contacts of Structural Units for 5NT1 Structure Factors (2264 Kb) Retrieve 5NT1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NT1 from S2C, [Save to disk]

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Visual 3D analysis of 5NT1

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nt1_F] [5nt1_I] [5nt1_B] [5nt1_E] [5nt1_J] [5nt1_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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