5NZZ Transferase date May 15, 2017
title Crystal Structure Of Phosphorylated P38amapk In Complex With
authors C.E.Nichols, G.F.De Nicola
compound source
Molecule: Tgf-Beta-Activated Kinase 1 And Map3k7-Binding Pr
Chain: A, B, C, D
Synonym: Mitogen-Activated Protein Kinase Kinase Kinase 7-I Protein 1,Tgf-Beta-Activated Kinase 1-Binding Protein 1,Tak Protein 1;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tab1, Map3k7ip1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Mitogen-Activated Protein Kinase 14
Chain: E, F, G, H
Synonym: Mapk 14,Crk1,Mitogen-Activated Protein Kinase P38 Kinase P38 Alpha;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Mapk14, Crk1, Csbp1, Csbp2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.219 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.879 107.632 144.204 89.26 76.75 84.28
method X-Ray Diffractionresolution 2.60 Å
ligand AGS, MG, NI, PTR, TPO enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B, C, D


F, E, H, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (460 Kb) [Save to disk]
  • Biological Unit Coordinates (5nzz.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (5nzz.pdb2.gz) 120 Kb
  • Biological Unit Coordinates (5nzz.pdb3.gz) 118 Kb
  • Biological Unit Coordinates (5nzz.pdb4.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 5NZZ
  • CSU: Contacts of Structural Units for 5NZZ
  • Structure Factors (2442 Kb)
  • Retrieve 5NZZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NZZ from S2C, [Save to disk]
    • View 5NZZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5NZZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nzz_D] [5nzz_C] [5nzz_E] [5nzz_G] [5nzz_H] [5nzz_B] [5nzz_A] [5nzz_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5NZZ
  • Community annotation for 5NZZ at PDBWiki (http://pdbwiki.org)

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