5OD2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5ID, GLC, MG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, A
  • phosphofructokinase activity...


    • Primary referenceCrystal structure of ADP-dependent glucokinase from Methanocaldococcus jannaschii in complex with 5-iodotubercidin reveals phosphoryl transfer mechanism., Tokarz P, Wisniewska M, Kaminski MM, Dubin G, Grudnik P, Protein Sci. 2018 Jan 20. doi: 10.1002/pro.3377. PMID:29352744
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (238 Kb) [Save to disk]
  • Biological Unit Coordinates (5od2.pdb1.gz) 79 Kb
  • Biological Unit Coordinates (5od2.pdb2.gz) 81 Kb
  • Biological Unit Coordinates (5od2.pdb3.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 5OD2
  • CSU: Contacts of Structural Units for 5OD2
  • Structure Factors (650 Kb)
  • Retrieve 5OD2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OD2 from S2C, [Save to disk]
    • View 5OD2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5od2_A] [5od2_B] [5od2_C]
  • SWISS-PROT database:

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