5OYM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceCloning, purification and structure determination of the HIV integrase-binding domain of lens epithelium-derived growth factor., Hannon C, Cruz-Migoni A, Platonova O, Owen RL, Nettleship JE, Miller A, Carr SB, Harris G, Rabbitts TH, Phillips SEV, Acta Crystallogr F Struct Biol Commun. 2018 Mar 1;74(Pt 3):143-149. doi:, 10.1107/S2053230X18001553. Epub 2018 Feb 26. PMID:29497017
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (5oym.pdb1.gz) 122 Kb
  • CSU: Contacts of Structural Units for 5OYM
  • Structure Factors (1561 Kb)
  • Retrieve 5OYM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OYM from S2C, [Save to disk]
    • View 5OYM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5oym_A] [5oym_B] [5oym_C] [5oym_D] [5oym_E] [5oym_F] [5oym_G] [5oym_H]
  • SWISS-PROT database:

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