5TX5 Transferase Transferase Inhibitor date Nov 15, 2016
title Rip1 Kinase ( Flag 1-294, C34a, C127a, C233a, C240a) With Gs
authors N.Campobasso, P.Ward, J.Thrope
compound source
Molecule: Receptor-Interacting Serinethreonine-Protein Kin
Chain: A, B
Synonym: Cell Death Protein Rip,Receptor-Interacting Protei Serinethreonine-Protein Kinase Rip;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ripk1, Rip, Rip1
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 21 21 21
R_factor 0.197 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.774 101.246 129.753 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.56 Å
ligand 7MJ enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (5tx5.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 5TX5
  • CSU: Contacts of Structural Units for 5TX5
  • Structure Factors (505 Kb)
  • Retrieve 5TX5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TX5 from S2C, [Save to disk]
  • Re-refined 5tx5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TX5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TX5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tx5_A] [5tx5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TX5
  • Community annotation for 5TX5 at PDBWiki (http://pdbwiki.org)

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