5TXO	Transferase Dna	date	Nov 17, 2016
title	Structure Of Q151m Complex (A62v, V75i, F77l, F116y, Q151m) Hiv-1 Reverse Transcriptase (Rt) Ternary Complex With A Dou Stranded Dna And An Incoming Datp
authors	K.Das, S.M.Martinez, E.Arnold
compound		source
Molecule: Hiv-1 Reverse Transcriptase P66 Subunit Chain: A, C Synonym: Pr160gag-Pol Ec: 2.7.7.49,2.7.7.7 Engineered: Yes Mutation: Yes		Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Bh10); Organism_common: Hiv-1 Organism_taxid: 11678 Strain: Isolate Bh10 Gene: Gag-Pol Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Hiv-1 Reverse Transcriptase P51 Subunit Chain: B, D Synonym: Pr160gag-Pol Ec: 2.7.7.49,2.7.7.7 Engineered: Yes Mutation: Yes		Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Bh10); Organism_common: Hiv-1 Organism_taxid: 11678 Strain: Isolate Bh10 Gene: Gag-Pol Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'- D(Tpgpgptpcpgpgpcpgpcpcpcpgpapapcpapgpgp Tpg)-3'); Chain: T, E Engineered: Yes		Synthetic: Yes Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676
Molecule: Dna (5'-D(Cpapgptpcpcpcptpgptptpcpgp Pcpgpcpcpg)-3'); Chain: P, F Engineered: Yes		Synthetic: Yes Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676
symmetry	Space Group: P 1 21 1	R_factor 0.191 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.990 132.930 139.120 90.00 97.38 90.00
method	X-Ray Diffraction	resolution	2.55 Å
ligand	DTP, EDO, FRU, GLC, MG, MRG, SO4	enzyme	Transferase E.C.2.7.7.49 BRENDA
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex that Confer Multi-Nucleoside Drug Resistance., Das K, Martinez SE, Arnold E, Antimicrob Agents Chemother. 2017 Apr 10. pii: AAC.00224-17. doi:, 10.1128/AAC.00224-17. PMID:28396546

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (761 Kb) [Save to disk] Biological Unit Coordinates (5txo.pdb1.gz) 378 Kb Biological Unit Coordinates (5txo.pdb2.gz) 378 Kb LPC: Ligand-Protein Contacts for 5TXO CSU: Contacts of Structural Units for 5TXO Structure Factors (1480 Kb) Retrieve 5TXO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TXO from S2C, [Save to disk] Re-refined 5txo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TXO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5TXO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5txo_T] [5txo_E] [5txo_C] [5txo_A] [5txo_B] [5txo_F] [5txo_P] [5txo] [5txo_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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