5U2J Hydrolase date Nov 30, 2016
title Morf Double Phd Finger (Dpf) In Complex With Histone H3k14bu
authors F.H.Andrews, B.J.Klein, T.G.Kutateladze
compound source
Molecule: Histone H3k14bu
Chain: D, C
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606

Molecule: Histone Acetyltransferase Kat6b
Chain: A, B
Fragment: Unp Residues 211-320
Synonym: Histone Acetyltransferase Moz2,Moz,Ybf2sas3,Sas2 Protein 4,Myst-4,Monocytic Leukemia Zinc Finger Protein-Rel Factor;
Ec: 2.3.1.48
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kat6b, Kiaa0383, Morf, Moz2, Myst4
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1 21 1
R_factor 0.191 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.540 69.190 69.930 90.00 97.16 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand BTK, ZN enzyme Transferase E.C.2.3.1.48 BRENDA
Primary referenceRecognition of Histone H3K14 Acylation by MORF., Klein BJ, Simithy J, Wang X, Ahn J, Andrews FH, Zhang Y, Cote J, Shi X, Garcia BA, Kutateladze TG, Structure. 2017 Apr 4;25(4):650-654.e2. doi: 10.1016/j.str.2017.02.003. Epub 2017, Mar 9. PMID:28286003
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (5u2j.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (5u2j.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 5U2J
  • CSU: Contacts of Structural Units for 5U2J
  • Structure Factors (1006 Kb)
  • Retrieve 5U2J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U2J from S2C, [Save to disk]
  • Re-refined 5u2j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5U2J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5U2J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u2j_B] [5u2j] [5u2j_A] [5u2j_D] [5u2j_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5U2J
  • Community annotation for 5U2J at PDBWiki (http://pdbwiki.org)

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