5U6B	Transferase Transferase Inhibitor	date	Dec 07, 2016
title	Structure Of The Axl Kinase Domain In Complex With A Macrocy Inhibitor
authors	K.S.Gajiwala, N.Grodsky
compound		source
Molecule: Tyrosine-Protein Kinase Receptor Ufo Chain: A, B, C, D Fragment: Unp Residues 514-818 Synonym: Axl Oncogene Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Axl, Ufo Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
symmetry	Space Group: P 1 21 1	R_factor 0.211 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.680 100.704 81.921 90.00 93.97 90.00
method	X-Ray Diffraction	resolution	2.84 Å
ligand	7YS	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The Axl Kinase Domain in Complex with a Macrocyclic Inhibitor Offers First Structural Insights into an Active TAM Receptor Kinase., Gajiwala KS, Grodsky N, Bolanos B, Feng J, Ferre R, Timofeevski S, Xu M, Murray BW, Johnson TW, Stewart A, J Biol Chem. 2017 Jul 19. pii: jbc.M116.771485. doi: 10.1074/jbc.M116.771485. PMID:28724631

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk] Biological Unit Coordinates (5u6b.pdb1.gz) 46 Kb Biological Unit Coordinates (5u6b.pdb2.gz) 49 Kb Biological Unit Coordinates (5u6b.pdb3.gz) 46 Kb Biological Unit Coordinates (5u6b.pdb4.gz) 49 Kb LPC: Ligand-Protein Contacts for 5U6B CSU: Contacts of Structural Units for 5U6B Structure Factors (244 Kb) Retrieve 5U6B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5U6B from S2C, [Save to disk] Re-refined 5u6b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5U6B in 3D

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Visual 3D analysis of 5U6B

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5u6b_A] [5u6b_C] [5u6b_B] [5u6b_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5U6B

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