5V2D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, D, B, A


Primary referenceStructure and function of a lignostilbene-alpha,beta-dioxygenase orthologue from Pseudomonas brassicacearum., Loewen PC, Switala J, Wells JP, Huang F, Zara AT, Allingham JS, Loewen MC, BMC Biochem. 2018 Aug 16;19(1):8. doi: 10.1186/s12858-018-0098-4. PMID:30115012
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (635 Kb) [Save to disk]
  • Biological Unit Coordinates (5v2d.pdb1.gz) 164 Kb
  • Biological Unit Coordinates (5v2d.pdb2.gz) 161 Kb
  • Biological Unit Coordinates (5v2d.pdb3.gz) 161 Kb
  • Biological Unit Coordinates (5v2d.pdb4.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 5V2D
  • CSU: Contacts of Structural Units for 5V2D
  • Structure Factors (7453 Kb)
  • Retrieve 5V2D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V2D from S2C, [Save to disk]
  • View 5V2D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v2d_A] [5v2d_B] [5v2d_C] [5v2d_D]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science