5V52 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, NAG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


C, D


Primary referenceRecognition of nectin-2 by the natural killer cell receptor T cell immunoglobulin and ITIM domain (TIGIT)., Deuss FA, Gully BS, Rossjohn J, Berry R, J Biol Chem. 2017 Jul 7;292(27):11413-11422. doi: 10.1074/jbc.M117.786483. Epub, 2017 May 17. PMID:28515320
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (5v52.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (5v52.pdb2.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 5V52
  • CSU: Contacts of Structural Units for 5V52
  • Structure Factors (543 Kb)
  • Retrieve 5V52 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V52 from S2C, [Save to disk]
  • Re-refined 5v52 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5V52 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v52] [5v52_A] [5v52_B] [5v52_C] [5v52_D]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science