5VBQ	Transcription Inhibitor	date	Mar 30, 2017
title	Crystal Structure Of The First Bromodomain Of Human Brdt In With Bi2536
authors	S.W.Ember, J.Y.Zhu, E.Schonbrunn
compound		source
Molecule: Bromodomain Testis-Specific Protein Chain: A, B Fragment: Unp Residues 29-137 Synonym: Cancertestis Antigen 9,Ct9,Ring3-Like Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Brdt Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 1 21 1	R_factor 0.144 R_Free 0.172
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.590 31.000 69.470 90.00 96.90 90.00
method	X-Ray Diffraction	resolution	1.65 Å

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (5vbq.pdb1.gz) 65 Kb Biological Unit Coordinates (5vbq.pdb2.gz) 64 Kb CSU: Contacts of Structural Units for 5VBQ Structure Factors (260 Kb) Retrieve 5VBQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VBQ from S2C, [Save to disk]

View 5VBQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5VBQ

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5vbq from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vbq_B] [5vbq_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5VBQ

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