5VHV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9B4, GOL, MES, NA, NRI enzyme
Primary referenceSelective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC., Shi R, Mullins EA, Shen XX, Lay KT, Yuen PK, David SS, Rokas A, Eichman BF, EMBO J. 2017 Oct 20. pii: e201797833. doi: 10.15252/embj.201797833. PMID:29054852
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (430 Kb) [Save to disk]
  • Biological Unit Coordinates (5vhv.pdb1.gz) 211 Kb
  • Biological Unit Coordinates (5vhv.pdb2.gz) 212 Kb
  • LPC: Ligand-Protein Contacts for 5VHV
  • CSU: Contacts of Structural Units for 5VHV
  • Structure Factors (833 Kb)
  • Retrieve 5VHV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VHV from S2C, [Save to disk]
  • View 5VHV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vhv_A] [5vhv_B] [5vhv_C] [5vhv_D] [5vhv_E] [5vhv_F]
  • SWISS-PROT database:

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