5VIK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BLA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesigning brighter near-infrared fluorescent proteins: insights from structural and biochemical studies., Baloban M, Shcherbakova DM, Pletnev S, Pletnev VZ, Lagarias JC, Verkhusha VV, Chem Sci. 2017 Jun 1;8(6):4546-4557. doi: 10.1039/c7sc00855d. Epub 2017 May 4. PMID:28936332
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (5vik.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 5VIK
  • CSU: Contacts of Structural Units for 5VIK
  • Structure Factors (491 Kb)
  • Retrieve 5VIK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VIK from S2C, [Save to disk]
  • Re-refined 5vik structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5VIK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vik_A]
  • SWISS-PROT database:

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